Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846273.1_cds_XP_016509584.1_22505
CDS Infomation

[gene=LOC107827040] [db_xref=GeneID:107827040] [protein=beta-amylase 2, chloroplastic-like] [protein_id=XP_016509584.1] [location=join(26359..26496,28573..28642,28889..29060,31475..31556,34333..34412,36946..37093,37225..37419,37748..37912,38955..39215,39327..39557)] [gbkey=CDS]
Sequence

ATGTTTGGTTTGGAGCCCCGAGTATCGCACTTGCAAAGAAAGATCGCATTTGCGATCAGT
GGGGCTGGGAGGGGACCTTTGCAATTGCGAGGCGCAGGATCGCACTTGCGATGTGAGCAG
GCTGCATTTGCGATGAAGATGACGAGAACACGTACAACTTTATCAGCTGATCAGCAGCGC
GAGCCCCCATTGGCAGCTCCTACAAGGGCACCAGTCATCTCTCAGGCTGGGGGAGGAGCT
CAGACTCCCGCTACCTACACTTTGGAGCAGATAGCTCCTCAATTCCAGACTCCAGCAGCT
CAGCCAGTAGGAGTAGCTCAGCCAGTTGTTGTGGCTCAGACCGCTGGTGGATCATCTATG
TCTTCTAAGGCTTTGTTGAGGCCACTACTGTCGGTTCCTGGATGGGTTTTCATCCATAGC
AGCCTTGATGACCAAATTGACCCAGAAGTGTGCCCCATTCAGGTGTGCAGGCTTCGCATT
TGCAAAGCCTGGCTCGCAAATGCTAGTGTCGCACTTGCGAAGAAAGATCGCATTTGCGAT
CATGGAACTCCTCAATTTCCACTTAGAGAGAAGTCTCNCGTCGTGGAGTGCTGGTGGGGT
ATAGTGGAGGCGCATGCCCCAAAAAGATATAATTGGGGCGGTTACAAGAGGCTTTTTGAA
ATTGTTCGAGATCTTAACTTAAAATTGCGGGTGGTAATGTCATTCCATGAATGCGGAGGA
AATGTCGGTGATGATGTTCATATTCCTCTTCCACGATGGGTTACAGAAATTGGTTACAAA
AATCCAGACATATTTTTTGCAGACAGAGATCTTAGAAGAACCCATGAATGTCTCACCTGG
GGAATTGACAAGGAGCGTGTTTTAAGAGGACGAACTGCTCTTGAGGTTTACTTTGGTTTA
ATGAGAAGCTTCAGCGTGGAGTTCATTGAGTTCTTTGAAAATGGAGTCATCTCTGAGATT
GAAATTGGACTTGGTCCATGTGGAGAATTACGATACCCTTCTCATTCTGCAAAACTTGGG
TGGAAATATCCTGGTATTGGTGAATTTCAGTGCTATGATAAGTACTTGTTTAATAGCTTG
CAAAAGGCAGCAGAGGCATCCGGATCCTCATCCTCTGGTAAAGGACCTTGGAATGCAGGT
TCTTACAATTCTAAACCACAAAAGACTGAGTTTTTTCGTGATGGCGGAGAATATAATCGC
TTTTATGGCAGATTTTTCTTGAAATGGTACACTCAAGTTTTAATTGATCATGCTGATCAA
GTACTTGGCTTGGCAAATTTGTCTTTTAAAGGCACTCCTATAGCAGCAAAGCTACCAGGA
ATCTATTGGTGGCGCAATACTAAGAGTGGTGCAGCTGAATTAACAGCTGGCTTTTACAGT
GTTAACTGTCGTGATGGCTATTCTCCAATAGCATCAATGTTAAAGAAGCGTGAGGCAGCT
CTGAATTTCACATGTCTTGAATTGCACACAGTTGATCAGAAAAAGGACTTCCCACAAGCA
TTAGCTGACCCAGAAGGACTAGTTTGGCAGGTAAACATGTGA

Peptide Sequence

PEP ID

XP_016509584.1
PEP Infomation

PREDICTED: beta-amylase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MFGLEPRVSHLQRKIAFAISGAGRGPLQLRGAGSHLRCEQAAFAMKMTRTRTTLSADQQR
EPPLAAPTRAPVISQAGGGAQTPATYTLEQIAPQFQTPAAQPVGVAQPVVVAQTAGGSSM
SSKALLRPLLSVPGWVFIHSSLDDQIDPEVCPIQVCRLRICKAWLANASVALAKKDRICD
HGTPQFPLREKSXVVECWWGIVEAHAPKRYNWGGYKRLFEIVRDLNLKLRVVMSFHECGG
NVGDDVHIPLPRWVTEIGYKNPDIFFADRDLRRTHECLTWGIDKERVLRGRTALEVYFGL
MRSFSVEFIEFFENGVISEIEIGLGPCGELRYPSHSAKLGWKYPGIGEFQCYDKYLFNSL
QKAAEASGSSSSGKGPWNAGSYNSKPQKTEFFRDGGEYNRFYGRFFLKWYTQVLIDHADQ
VLGLANLSFKGTPIAAKLPGIYWWRNTKSGAAELTAGFYSVNCRDGYSPIASMLKKREAA
LNFTCLELHTVDQKKDFPQALADPEGLVWQVNM

Transcript Sequence

Gene sequence data has not been registered.